CDS

Accession Number TCMCG007C53376
gbkey CDS
Protein Id XP_009112789.1
Location complement(join(8670551..8670616,8670832..8670954,8671030..8671371,8671449..8671612,8671707..8671806,8671981..8672047,8672139..8672229,8672321..8672348,8672427..8672503,8672596..8672680,8672747..8672824))
Gene LOC103838116
GeneID 103838116
Organism Brassica rapa

Protein

Length 406aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_009114541.3
Definition nucleolin isoform X1 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category AD
Description glycine rich nucleic binding domain
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
ko03032        [VIEW IN KEGG]
KEGG_ko ko:K11135        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000070        [VIEW IN EMBL-EBI]
GO:0000228        [VIEW IN EMBL-EBI]
GO:0000278        [VIEW IN EMBL-EBI]
GO:0000280        [VIEW IN EMBL-EBI]
GO:0000723        [VIEW IN EMBL-EBI]
GO:0000775        [VIEW IN EMBL-EBI]
GO:0000776        [VIEW IN EMBL-EBI]
GO:0000781        [VIEW IN EMBL-EBI]
GO:0000784        [VIEW IN EMBL-EBI]
GO:0000819        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0004857        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0005819        [VIEW IN EMBL-EBI]
GO:0005856        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006278        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007004        [VIEW IN EMBL-EBI]
GO:0007049        [VIEW IN EMBL-EBI]
GO:0007059        [VIEW IN EMBL-EBI]
GO:0007080        [VIEW IN EMBL-EBI]
GO:0007346        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009890        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010389        [VIEW IN EMBL-EBI]
GO:0010521        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010558        [VIEW IN EMBL-EBI]
GO:0010564        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010639        [VIEW IN EMBL-EBI]
GO:0010833        [VIEW IN EMBL-EBI]
GO:0010948        [VIEW IN EMBL-EBI]
GO:0010972        [VIEW IN EMBL-EBI]
GO:0015630        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0018130        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019438        [VIEW IN EMBL-EBI]
GO:0022402        [VIEW IN EMBL-EBI]
GO:0030234        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031327        [VIEW IN EMBL-EBI]
GO:0031396        [VIEW IN EMBL-EBI]
GO:0031397        [VIEW IN EMBL-EBI]
GO:0031399        [VIEW IN EMBL-EBI]
GO:0031400        [VIEW IN EMBL-EBI]
GO:0031647        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032200        [VIEW IN EMBL-EBI]
GO:0032204        [VIEW IN EMBL-EBI]
GO:0032205        [VIEW IN EMBL-EBI]
GO:0032210        [VIEW IN EMBL-EBI]
GO:0032211        [VIEW IN EMBL-EBI]
GO:0032268        [VIEW IN EMBL-EBI]
GO:0032269        [VIEW IN EMBL-EBI]
GO:0032879        [VIEW IN EMBL-EBI]
GO:0032880        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0033043        [VIEW IN EMBL-EBI]
GO:0033044        [VIEW IN EMBL-EBI]
GO:0033365        [VIEW IN EMBL-EBI]
GO:0034502        [VIEW IN EMBL-EBI]
GO:0034504        [VIEW IN EMBL-EBI]
GO:0034613        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034654        [VIEW IN EMBL-EBI]
GO:0042592        [VIEW IN EMBL-EBI]
GO:0043086        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043388        [VIEW IN EMBL-EBI]
GO:0044092        [VIEW IN EMBL-EBI]
GO:0044093        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044427        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044430        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044454        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044877        [VIEW IN EMBL-EBI]
GO:0045786        [VIEW IN EMBL-EBI]
GO:0045930        [VIEW IN EMBL-EBI]
GO:0045934        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048285        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0050000        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050790        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051052        [VIEW IN EMBL-EBI]
GO:0051053        [VIEW IN EMBL-EBI]
GO:0051098        [VIEW IN EMBL-EBI]
GO:0051099        [VIEW IN EMBL-EBI]
GO:0051101        [VIEW IN EMBL-EBI]
GO:0051128        [VIEW IN EMBL-EBI]
GO:0051129        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051172        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051246        [VIEW IN EMBL-EBI]
GO:0051248        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0051303        [VIEW IN EMBL-EBI]
GO:0051310        [VIEW IN EMBL-EBI]
GO:0051338        [VIEW IN EMBL-EBI]
GO:0051348        [VIEW IN EMBL-EBI]
GO:0051640        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0051656        [VIEW IN EMBL-EBI]
GO:0051726        [VIEW IN EMBL-EBI]
GO:0051972        [VIEW IN EMBL-EBI]
GO:0051974        [VIEW IN EMBL-EBI]
GO:0060249        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0060341        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0065009        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070034        [VIEW IN EMBL-EBI]
GO:0070198        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0071897        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0098687        [VIEW IN EMBL-EBI]
GO:0098772        [VIEW IN EMBL-EBI]
GO:0098813        [VIEW IN EMBL-EBI]
GO:0140014        [VIEW IN EMBL-EBI]
GO:1900180        [VIEW IN EMBL-EBI]
GO:1900182        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1901987        [VIEW IN EMBL-EBI]
GO:1901988        [VIEW IN EMBL-EBI]
GO:1901990        [VIEW IN EMBL-EBI]
GO:1901991        [VIEW IN EMBL-EBI]
GO:1902570        [VIEW IN EMBL-EBI]
GO:1902749        [VIEW IN EMBL-EBI]
GO:1902750        [VIEW IN EMBL-EBI]
GO:1903047        [VIEW IN EMBL-EBI]
GO:1903320        [VIEW IN EMBL-EBI]
GO:1903321        [VIEW IN EMBL-EBI]
GO:1903827        [VIEW IN EMBL-EBI]
GO:1903829        [VIEW IN EMBL-EBI]
GO:1904356        [VIEW IN EMBL-EBI]
GO:1904357        [VIEW IN EMBL-EBI]
GO:1904742        [VIEW IN EMBL-EBI]
GO:1904744        [VIEW IN EMBL-EBI]
GO:1904749        [VIEW IN EMBL-EBI]
GO:1904751        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000113        [VIEW IN EMBL-EBI]
GO:2000278        [VIEW IN EMBL-EBI]
GO:2000279        [VIEW IN EMBL-EBI]
GO:2001251        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGGCGCCGGAAGCTCCAGTCAAGTACGTCGGAATCCTAAAGGAATCCGCCGCTTTCCGCCTAATGAAATCAATGGGATGGGAAGAAGGAGAAGGACTAGGTAAAGATAAGCAAGGGATCAAAGGCTATGTCCGAGTCAAGAACAAGCAAGACACAACTGGTGTTGGTGTTGATAAGCCGAATCCATGGGCATTTGATACTACTCAGTTCGATAACATTCTCAAGAAGTTGAAAGTGCAAGCAGCTCCTAGCAAGAAAGACGATGCTTCGGACAAGGAAACTGAAAGTGAAGACGAAGCTGCCGAATCTGAGCCTGCCGTGTCCAAGGTTGCGAAAGTTACTCGTCCACAAGGAAGGTATAAACGTAGAGAGAAGGGGAAGCTTGTCAATTCTTACTCTTCTAAAGATCTTGAAGGAATACTTGTTAAGCGAACTGAGGAGCCTTCTCCTGTGATTTGCGACATAGCCGCCGATGCTATGGAGATTGAAATTATATCTGACGACCAACATGCTAGTGTTAAAGAACCGAAAATTGAAGAACCTTCTTCTGATTGGTGGGGATTTGAATCCGGGTTTGTCTCGGGTGGTCTTCTTGGAGCTAAGCCTGGCAAAAAGAAATCATCCAAGTCTAACGAGAGAAAAATGTTTTGTGAGGACGATCAAGAGAATCTTTACAACATGGTTCAGGATAAAGCCACAGCTGGAAAACAAGGACTTGGTATCAAAGACCGTCCAAAGAAGATAGCTGGTGTTCGTTACCAAGGGAAGAAAACATCTTTTGATAACAGTGATGATGATGATGATGATAATGATGATGAAGAGGAAGAAGAAGAGAGTGAAGAGGATGATGACAAGGACTCTGTTATCGAAAATTCTCTCCCAGCAAAAAGGAAGCGAGAAGAGAGTGAAGAAGAAGAAGACAACAAGGACTCTGTTATTGAAAACTCTCTCCCAGCAAAAAGGAAGCGTGATGAAATCATTGAACCCAAAATCAAGTTGAAGAACCTATGCAAGCAGATTCTTAAAAAGGTCGCTGATAGTAGCGGATCAATGAAGCTGAAACAGCTTAAATCTATGATTGATGAACAAGCACCATCAATTCTCTCAGAGTTCTCTTCAAGGAAAGATGCTATTGCTTACTTGAAACTTAAGCTGGAGCGAAGTGAGAAGTTTATTGTGGAGGGAAAGAAAATCAGTCTCGTATCAAAAAGGAAGTGA
Protein:  
MAAPEAPVKYVGILKESAAFRLMKSMGWEEGEGLGKDKQGIKGYVRVKNKQDTTGVGVDKPNPWAFDTTQFDNILKKLKVQAAPSKKDDASDKETESEDEAAESEPAVSKVAKVTRPQGRYKRREKGKLVNSYSSKDLEGILVKRTEEPSPVICDIAADAMEIEIISDDQHASVKEPKIEEPSSDWWGFESGFVSGGLLGAKPGKKKSSKSNERKMFCEDDQENLYNMVQDKATAGKQGLGIKDRPKKIAGVRYQGKKTSFDNSDDDDDDNDDEEEEEESEEDDDKDSVIENSLPAKRKREESEEEEDNKDSVIENSLPAKRKRDEIIEPKIKLKNLCKQILKKVADSSGSMKLKQLKSMIDEQAPSILSEFSSRKDAIAYLKLKLERSEKFIVEGKKISLVSKRK